Filter Options

Reset
Active Filters:
Species: Rhesus macaque
swipe Swipe horizontally to view all data
circRNA ID Gene Gene Type Strand (circRNA/Gene)
circRNA Type i

The back-fusion junctions (BFJs) of circRNAs from genic regions may have three possible positions relative to the nearest exon-intron boundaries of their cognate linear transcripts, giving rise to three circRNA subtypes:

(1) canonical (or completely boundary) circRNAs with both BFJs aligning to exon-intron boundaries;

(2) half interior (or half boundary) circRNAs with one, but not both, of the BFJs aligning to exon-intron boundaries;

(3) complete interior (or non-boundary) circRNAs with both junctions appearing inside of exons or introns.

Lariats are byproducts of splicing and can be regarded as variants of canonical circRNAs; for clarity, we list lariats separately here.

Intergenic circRNAs, derived from intergenic regions that often encode poorly annotated noncoding transcripts, can be considered a new distinct subtype of their own.

We collectively refer to complete interior, half interior, and intergenic circRNAs as noncanonical circRNAs (nc-circRNAs) to distinguish them from canonical circRNAs (c-circRNAs).

CircRNA Types Diagram
Position Length Species
intergenic/20:61148505-61148505-61186432-61186432--/. intergenic Na -/. intergenic 20:61148505-61186432 37927.0 Rhesus macaque
UBB/16:16007960-16007977-16008416-16008433--/- UBB protein_coding -/- interior 16:16007977-16008433 456.0 Rhesus macaque
UBB/16:16008326-16008334-16007870-16007878-+/- UBB protein_coding +/- antisense 16:16008334-16007878 456.0 Rhesus macaque
intergenic/11:124831392-124831394-124829800-124829802-+/. intergenic Na +/. intergenic 11:124831394-124829802 1592.0 Rhesus macaque
intergenic/11:124831326-124831337-124831098-124831109-+/. intergenic Na +/. intergenic 11:124831337-124831109 228.0 Rhesus macaque
intergenic/11:124830804-124830824-124830576-124830596-+/. intergenic Na +/. intergenic 11:124830804-124830576 228.0 Rhesus macaque
intergenic/11:124831098-124831109-124831326-124831337--/. intergenic Na -/. intergenic 11:124831109-124831337 228.0 Rhesus macaque
UBB/16:16008335-16008346-16008107-16008118-+/- UBB protein_coding +/- antisense 16:16008335-16008107 228.0 Rhesus macaque
intergenic/11:124830351-124830368-124831491-124831508--/. intergenic Na -/. intergenic 11:124830352-124831492 1140.0 Rhesus macaque
intergenic/11:124831260-124831280-124829896-124829916-+/. intergenic Na +/. intergenic 11:124831279-124829915 1364.0 Rhesus macaque