circRNA ID | Gene | Gene Type | Strand (circRNA/Gene) |
circRNA Type
The back-fusion junctions (BFJs) of circRNAs from genic regions may have three possible positions relative to the nearest exon-intron boundaries of their cognate linear transcripts, giving rise to three circRNA subtypes: (1) canonical (or completely boundary) circRNAs with both BFJs aligning to exon-intron boundaries; (2) half interior (or half boundary) circRNAs with one, but not both, of the BFJs aligning to exon-intron boundaries; (3) complete interior (or non-boundary) circRNAs with both junctions appearing inside of exons or introns. Lariats are byproducts of splicing and can be regarded as variants of canonical circRNAs; for clarity, we list lariats separately here. Intergenic circRNAs, derived from intergenic regions that often encode poorly annotated noncoding transcripts, can be considered a new distinct subtype of their own. We collectively refer to complete interior, half interior, and intergenic circRNAs as noncanonical circRNAs (nc-circRNAs) to distinguish them from canonical circRNAs (c-circRNAs). ![]() |
Position | Length | Species |
---|---|---|---|---|---|---|---|
intergenic/20:61148505-61148505-61186432-61186432--/. | intergenic | Na | -/. | intergenic | 20:61148505-61186432 | 37927.0 | Rhesus macaque |
UBB/16:16007960-16007977-16008416-16008433--/- | UBB | protein_coding | -/- | interior | 16:16007977-16008433 | 456.0 | Rhesus macaque |
UBB/16:16008326-16008334-16007870-16007878-+/- | UBB | protein_coding | +/- | antisense | 16:16008334-16007878 | 456.0 | Rhesus macaque |
intergenic/11:124831392-124831394-124829800-124829802-+/. | intergenic | Na | +/. | intergenic | 11:124831394-124829802 | 1592.0 | Rhesus macaque |
intergenic/11:124831326-124831337-124831098-124831109-+/. | intergenic | Na | +/. | intergenic | 11:124831337-124831109 | 228.0 | Rhesus macaque |
intergenic/11:124830804-124830824-124830576-124830596-+/. | intergenic | Na | +/. | intergenic | 11:124830804-124830576 | 228.0 | Rhesus macaque |
intergenic/11:124831098-124831109-124831326-124831337--/. | intergenic | Na | -/. | intergenic | 11:124831109-124831337 | 228.0 | Rhesus macaque |
UBB/16:16008335-16008346-16008107-16008118-+/- | UBB | protein_coding | +/- | antisense | 16:16008335-16008107 | 228.0 | Rhesus macaque |
intergenic/11:124830351-124830368-124831491-124831508--/. | intergenic | Na | -/. | intergenic | 11:124830352-124831492 | 1140.0 | Rhesus macaque |
intergenic/11:124831260-124831280-124829896-124829916-+/. | intergenic | Na | +/. | intergenic | 11:124831279-124829915 | 1364.0 | Rhesus macaque |