circRNA ID | Gene | Gene Type | Strand (circRNA/Gene) |
circRNA Type
The back-fusion junctions (BFJs) of circRNAs from genic regions may have three possible positions relative to the nearest exon-intron boundaries of their cognate linear transcripts, giving rise to three circRNA subtypes: (1) canonical (or completely boundary) circRNAs with both BFJs aligning to exon-intron boundaries; (2) half interior (or half boundary) circRNAs with one, but not both, of the BFJs aligning to exon-intron boundaries; (3) complete interior (or non-boundary) circRNAs with both junctions appearing inside of exons or introns. Lariats are byproducts of splicing and can be regarded as variants of canonical circRNAs; for clarity, we list lariats separately here. Intergenic circRNAs, derived from intergenic regions that often encode poorly annotated noncoding transcripts, can be considered a new distinct subtype of their own. We collectively refer to complete interior, half interior, and intergenic circRNAs as noncanonical circRNAs (nc-circRNAs) to distinguish them from canonical circRNAs (c-circRNAs). ![]() |
Position | Length | Species |
---|---|---|---|---|---|---|---|
intergenic/11:124264230-124264241-124264686-124264697--/. | intergenic | Na | -/. | intergenic | 11:124264230-124264686 | 456.0 | Crab-eating macaque |
intergenic/11:124264677-124264697-124264449-124264469-+/. | intergenic | Na | +/. | intergenic | 11:124264692-124264464 | 228.0 | Crab-eating macaque |
intergenic/11:124264695-124264697-124263553-124263555-+/. | intergenic | Na | +/. | intergenic | 11:124264695-124263553 | 1142.0 | Crab-eating macaque |
intergenic/11:124264641-124264655-124264185-124264199-+/. | intergenic | Na | +/. | intergenic | 11:124264642-124264186 | 456.0 | Crab-eating macaque |
intergenic/11:124264686-124264697-124264230-124264241-+/. | intergenic | Na | +/. | intergenic | 11:124264686-124264230 | 456.0 | Crab-eating macaque |
PIGL/16:16159698-16159715-16160154-16160171--/- | PIGL | protein_coding | -/- | interior | 16:16159698-16160154 | 456.0 | Crab-eating macaque |
UBB/16:16159833-16159850-16159605-16159622-+/- | UBB | protein_coding | +/- | antisense | 16:16159833-16159605 | 228.0 | Crab-eating macaque |
intergenic/11:124264842-124264847-124263928-124263933-+/. | intergenic | Na | +/. | intergenic | 11:124264842-124263928 | 914.0 | Crab-eating macaque |
intergenic/11:124264185-124264199-124263727-124263741-+/. | intergenic | Na | +/. | intergenic | 11:124264199-124263741 | 458.0 | Crab-eating macaque |
intergenic/11:124263706-124263726-124264164-124264184--/. | intergenic | Na | -/. | intergenic | 11:124263726-124264184 | 458.0 | Crab-eating macaque |