circRNA ID | Gene | Gene Type | Strand (circRNA/Gene) |
circRNA Type
The back-fusion junctions (BFJs) of circRNAs from genic regions may have three possible positions relative to the nearest exon-intron boundaries of their cognate linear transcripts, giving rise to three circRNA subtypes: (1) canonical (or completely boundary) circRNAs with both BFJs aligning to exon-intron boundaries; (2) half interior (or half boundary) circRNAs with one, but not both, of the BFJs aligning to exon-intron boundaries; (3) complete interior (or non-boundary) circRNAs with both junctions appearing inside of exons or introns. Lariats are byproducts of splicing and can be regarded as variants of canonical circRNAs; for clarity, we list lariats separately here. Intergenic circRNAs, derived from intergenic regions that often encode poorly annotated noncoding transcripts, can be considered a new distinct subtype of their own. We collectively refer to complete interior, half interior, and intergenic circRNAs as noncanonical circRNAs (nc-circRNAs) to distinguish them from canonical circRNAs (c-circRNAs). ![]() |
Position | Length | Species |
---|---|---|---|---|---|---|---|
intergenic/11:124831089-124831097-124830633-124830641-+/. | intergenic | Na | +/. | intergenic | 11:124831089-124830633 | 456.0 | Rhesus macaque |
intergenic/11:124831374-124831388-124829782-124829796-+/. | intergenic | Na | +/. | intergenic | 11:124831374-124829782 | 1592.0 | Rhesus macaque |
intergenic/11:124831389-124831391-124829797-124829799-+/. | intergenic | Na | +/. | intergenic | 11:124831391-124829799 | 1592.0 | Rhesus macaque |
UBB/16:16008095-16008097-16008323-16008325--/- | UBB | protein_coding | -/- | interior | 16:16008095-16008323 | 228.0 | Rhesus macaque |
UBB/16:16007999-16008016-16008227-16008244--/- | UBB | protein_coding | -/- | interior | 16:16008016-16008244 | 228.0 | Rhesus macaque |
intergenic/11:124831395-124831405-124830483-124830493-+/. | intergenic | Na | +/. | intergenic | 11:124831405-124830493 | 912.0 | Rhesus macaque |
UBB/16:16008227-16008244-16007999-16008016-+/- | UBB | protein_coding | +/- | antisense | 16:16008244-16008016 | 228.0 | Rhesus macaque |
intergenic/11:124831482-124831487-124831254-124831259-+/. | intergenic | Na | +/. | intergenic | 11:124831482-124831254 | 228.0 | Rhesus macaque |
intergenic/11:124831512-124831532-124830828-124830848-+/. | intergenic | Na | +/. | intergenic | 11:124831512-124830828 | 684.0 | Rhesus macaque |
intergenic/11:124831389-124831391-124830025-124830027-+/. | intergenic | Na | +/. | intergenic | 11:124831391-124830027 | 1364.0 | Rhesus macaque |