circRNA ID | Gene | Gene Type | Strand (circRNA/Gene) |
circRNA Type
The back-fusion junctions (BFJs) of circRNAs from genic regions may have three possible positions relative to the nearest exon-intron boundaries of their cognate linear transcripts, giving rise to three circRNA subtypes: (1) canonical (or completely boundary) circRNAs with both BFJs aligning to exon-intron boundaries; (2) half interior (or half boundary) circRNAs with one, but not both, of the BFJs aligning to exon-intron boundaries; (3) complete interior (or non-boundary) circRNAs with both junctions appearing inside of exons or introns. Lariats are byproducts of splicing and can be regarded as variants of canonical circRNAs; for clarity, we list lariats separately here. Intergenic circRNAs, derived from intergenic regions that often encode poorly annotated noncoding transcripts, can be considered a new distinct subtype of their own. We collectively refer to complete interior, half interior, and intergenic circRNAs as noncanonical circRNAs (nc-circRNAs) to distinguish them from canonical circRNAs (c-circRNAs). ![]() |
Position | Length | Species |
---|---|---|---|---|---|---|---|
ABCC3/17:50678211-50678213-50678045-50678047-+/+ | ABCC3 | protein_coding | +/+ | interior | 17:50678211-50678045 | 166.0 | Human |
ABCC3/17:50678216-50678219-50677740-50677743-+/+ | ABCC3 | protein_coding | +/+ | canonical (exon-exon) | 17:50678219-50677743 | 476.0 | Human |
ABCC4/13:95034606-95034609-95053186-95053189--/- | ABCC4 | protein_coding | -/- | partial | 13:95034606-95053186 | 18580.0 | Human |
ABCC4/13:95161191-95161195-95166370-95166374--/- | ABCC4 | protein_coding | -/- | interior | 13:95161191-95166370 | 5179.0 | Human |
ABCC4/13:95243406-95243410-95243601-95243605--/- | ABCC4 | protein_coding | -/- | interior | 13:95243406-95243601 | 195.0 | Human |
ABCD1/X:153730530-153730536-153729976-153729982-+/+ | ABCD1 | protein_coding | +/+ | interior | X:153730530-153729976 | 554.0 | Human |
ABCD3/1:94463100-94463108-94462966-94462974-+/+ | ABCD3 | protein_coding | +/+ | interior | 1:94463100-94462966 | 134.0 | Human |
ABCF2-H2BK1/7:151213709-151213712-151213933-151213936--/- | ABCF2-H2BK1 | protein_coding | -/- | interior | 7:151213709-151213933 | 224.0 | Human |
ABCF2-H2BK1/7:151219107-151219108-151226358-151226359--/- | ABCF2-H2BK1 | protein_coding | -/- | interior | 7:151219107-151226358 | 7251.0 | Human |
ABHD11/7:73736487-73736488-73736619-73736620--/- | ABHD11 | protein_coding | -/- | interior | 7:73736487-73736619 | 132.0 | Human |