circRNA ID | Gene | Gene Type | Strand (circRNA/Gene) |
circRNA Type
The back-fusion junctions (BFJs) of circRNAs from genic regions may have three possible positions relative to the nearest exon-intron boundaries of their cognate linear transcripts, giving rise to three circRNA subtypes: (1) canonical (or completely boundary) circRNAs with both BFJs aligning to exon-intron boundaries; (2) half interior (or half boundary) circRNAs with one, but not both, of the BFJs aligning to exon-intron boundaries; (3) complete interior (or non-boundary) circRNAs with both junctions appearing inside of exons or introns. Lariats are byproducts of splicing and can be regarded as variants of canonical circRNAs; for clarity, we list lariats separately here. Intergenic circRNAs, derived from intergenic regions that often encode poorly annotated noncoding transcripts, can be considered a new distinct subtype of their own. We collectively refer to complete interior, half interior, and intergenic circRNAs as noncanonical circRNAs (nc-circRNAs) to distinguish them from canonical circRNAs (c-circRNAs). ![]() |
Position | Length | Species |
---|---|---|---|---|---|---|---|
intergenic/11:124829917-124829919-124830825-124830827--/. | intergenic | Na | -/. | intergenic | 11:124829919-124830827 | 908.0 | Rhesus macaque |
intergenic/11:124829953-124829961-124830405-124830413--/. | intergenic | Na | -/. | intergenic | 11:124829961-124830413 | 452.0 | Rhesus macaque |
intergenic/11:124831098-124831109-124830414-124830425-+/. | intergenic | Na | +/. | intergenic | 11:124831109-124830425 | 684.0 | Rhesus macaque |
intergenic/11:124829881-124829895-124830561-124830575--/. | intergenic | Na | -/. | intergenic | 11:124829881-124830561 | 680.0 | Rhesus macaque |
intergenic/11:124830369-124830371-124830825-124830827--/. | intergenic | Na | -/. | intergenic | 11:124830371-124830827 | 456.0 | Rhesus macaque |
intergenic/11:124829782-124829796-124830462-124830476--/. | intergenic | Na | -/. | intergenic | 11:124829796-124830476 | 680.0 | Rhesus macaque |
intergenic/11:124830477-124830479-124829797-124829799-+/. | intergenic | Na | +/. | intergenic | 11:124830479-124829799 | 680.0 | Rhesus macaque |
intergenic/11:124830561-124830575-124829881-124829895-+/. | intergenic | Na | +/. | intergenic | 11:124830561-124829881 | 680.0 | Rhesus macaque |
intergenic/11:124830825-124830827-124830597-124830599-+/. | intergenic | Na | +/. | intergenic | 11:124830827-124830599 | 228.0 | Rhesus macaque |
UBB/16:16007867-16007884-16008095-16008112--/- | UBB | protein_coding | -/- | interior | 16:16007875-16008103 | 228.0 | Rhesus macaque |