circRNA ID | Gene | Gene Type | Strand (circRNA/Gene) |
circRNA Type
The back-fusion junctions (BFJs) of circRNAs from genic regions may have three possible positions relative to the nearest exon-intron boundaries of their cognate linear transcripts, giving rise to three circRNA subtypes: (1) canonical (or completely boundary) circRNAs with both BFJs aligning to exon-intron boundaries; (2) half interior (or half boundary) circRNAs with one, but not both, of the BFJs aligning to exon-intron boundaries; (3) complete interior (or non-boundary) circRNAs with both junctions appearing inside of exons or introns. Lariats are byproducts of splicing and can be regarded as variants of canonical circRNAs; for clarity, we list lariats separately here. Intergenic circRNAs, derived from intergenic regions that often encode poorly annotated noncoding transcripts, can be considered a new distinct subtype of their own. We collectively refer to complete interior, half interior, and intergenic circRNAs as noncanonical circRNAs (nc-circRNAs) to distinguish them from canonical circRNAs (c-circRNAs). ![]() |
Position | Length | Species |
---|---|---|---|---|---|---|---|
intergenic/11:124829782-124829796-124831374-124831388--/. | intergenic | Na | -/. | intergenic | 11:124829796-124831388 | 1592.0 | Rhesus macaque |
intergenic/11:124830918-124830932-124829782-124829796-+/. | intergenic | Na | +/. | intergenic | 11:124830918-124829782 | 1136.0 | Rhesus macaque |
intergenic/11:124830555-124830560-124829875-124829880-+/. | intergenic | Na | +/. | intergenic | 11:124830555-124829875 | 680.0 | Rhesus macaque |
UBB/16:16008095-16008112-16007867-16007884-+/- | UBB | protein_coding | +/- | antisense | 16:16008095-16007867 | 228.0 | Rhesus macaque |
UBB/16:16008239-16008244-16007783-16007788-+/- | UBB | protein_coding | +/- | antisense | 16:16008239-16007783 | 456.0 | Rhesus macaque |
MYL12B/18:64505868-64505872-64484466-64484470-+/+ | MYL12B | protein_coding | +/+ | interior | 18:64505872-64484470 | 21402.0 | Rhesus macaque |
UBB/16:16008158-16008160-16008386-16008388--/- | UBB | protein_coding | -/- | interior | 16:16008160-16008388 | 228.0 | Rhesus macaque |
intergenic/11:124830828-124830848-124831512-124831532--/. | intergenic | Na | -/. | intergenic | 11:124830848-124831532 | 684.0 | Rhesus macaque |
intergenic/11:124830950-124830962-124831406-124831418--/. | intergenic | Na | -/. | intergenic | 11:124830951-124831407 | 456.0 | Rhesus macaque |
UBB/16:16008341-16008346-16007885-16007890-+/- | UBB | protein_coding | +/- | antisense | 16:16008341-16007885 | 456.0 | Rhesus macaque |