circRNA ID | Gene | Gene Type | Strand (circRNA/Gene) |
circRNA Type
The back-fusion junctions (BFJs) of circRNAs from genic regions may have three possible positions relative to the nearest exon-intron boundaries of their cognate linear transcripts, giving rise to three circRNA subtypes: (1) canonical (or completely boundary) circRNAs with both BFJs aligning to exon-intron boundaries; (2) half interior (or half boundary) circRNAs with one, but not both, of the BFJs aligning to exon-intron boundaries; (3) complete interior (or non-boundary) circRNAs with both junctions appearing inside of exons or introns. Lariats are byproducts of splicing and can be regarded as variants of canonical circRNAs; for clarity, we list lariats separately here. Intergenic circRNAs, derived from intergenic regions that often encode poorly annotated noncoding transcripts, can be considered a new distinct subtype of their own. We collectively refer to complete interior, half interior, and intergenic circRNAs as noncanonical circRNAs (nc-circRNAs) to distinguish them from canonical circRNAs (c-circRNAs). ![]() |
Position | Length | Species |
---|---|---|---|---|---|---|---|
intergenic/11:124831380-124831394-124830241-124830255-+/. | intergenic | Na | +/. | intergenic | 11:124831380-124830241 | 1139.0 | Rhesus macaque |
intergenic/11:124830825-124830827-124829917-124829919-+/. | intergenic | Na | +/. | intergenic | 11:124830827-124829919 | 908.0 | Rhesus macaque |
intergenic/11:124829875-124829880-124830555-124830560--/. | intergenic | Na | -/. | intergenic | 11:124829875-124830555 | 680.0 | Rhesus macaque |
intergenic/11:124831008-124831010-124830324-124830326-+/. | intergenic | Na | +/. | intergenic | 11:124831008-124830324 | 684.0 | Rhesus macaque |
intergenic/11:124830405-124830413-124831089-124831097--/. | intergenic | Na | -/. | intergenic | 11:124830409-124831093 | 684.0 | Rhesus macaque |
intergenic/11:124830180-124830182-124829953-124829955-+/. | intergenic | Na | +/. | intergenic | 11:124830182-124829955 | 227.0 | Rhesus macaque |
MYL12B/18:64484466-64484470-64505868-64505872--/+ | MYL12B | protein_coding | -/+ | antisense | 18:64484470-64505872 | 21402.0 | Rhesus macaque |
UBB/16:16008386-16008388-16008158-16008160-+/- | UBB | protein_coding | +/- | antisense | 16:16008386-16008158 | 228.0 | Rhesus macaque |
intergenic/11:124831017-124831031-124829881-124829895-+/. | intergenic | Na | +/. | intergenic | 11:124831017-124829881 | 1136.0 | Rhesus macaque |
intergenic/11:124830783-124830788-124829875-124829880-+/. | intergenic | Na | +/. | intergenic | 11:124830783-124829875 | 908.0 | Rhesus macaque |