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Species: Rhesus macaque
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circRNA ID Gene Gene Type Strand (circRNA/Gene)
circRNA Type i

The back-fusion junctions (BFJs) of circRNAs from genic regions may have three possible positions relative to the nearest exon-intron boundaries of their cognate linear transcripts, giving rise to three circRNA subtypes:

(1) canonical (or completely boundary) circRNAs with both BFJs aligning to exon-intron boundaries;

(2) half interior (or half boundary) circRNAs with one, but not both, of the BFJs aligning to exon-intron boundaries;

(3) complete interior (or non-boundary) circRNAs with both junctions appearing inside of exons or introns.

Lariats are byproducts of splicing and can be regarded as variants of canonical circRNAs; for clarity, we list lariats separately here.

Intergenic circRNAs, derived from intergenic regions that often encode poorly annotated noncoding transcripts, can be considered a new distinct subtype of their own.

We collectively refer to complete interior, half interior, and intergenic circRNAs as noncanonical circRNAs (nc-circRNAs) to distinguish them from canonical circRNAs (c-circRNAs).

CircRNA Types Diagram
Position Length Species
intergenic/11:124831380-124831394-124830241-124830255-+/. intergenic Na +/. intergenic 11:124831380-124830241 1139.0 Rhesus macaque
intergenic/11:124830825-124830827-124829917-124829919-+/. intergenic Na +/. intergenic 11:124830827-124829919 908.0 Rhesus macaque
intergenic/11:124829875-124829880-124830555-124830560--/. intergenic Na -/. intergenic 11:124829875-124830555 680.0 Rhesus macaque
intergenic/11:124831008-124831010-124830324-124830326-+/. intergenic Na +/. intergenic 11:124831008-124830324 684.0 Rhesus macaque
intergenic/11:124830405-124830413-124831089-124831097--/. intergenic Na -/. intergenic 11:124830409-124831093 684.0 Rhesus macaque
intergenic/11:124830180-124830182-124829953-124829955-+/. intergenic Na +/. intergenic 11:124830182-124829955 227.0 Rhesus macaque
MYL12B/18:64484466-64484470-64505868-64505872--/+ MYL12B protein_coding -/+ antisense 18:64484470-64505872 21402.0 Rhesus macaque
UBB/16:16008386-16008388-16008158-16008160-+/- UBB protein_coding +/- antisense 16:16008386-16008158 228.0 Rhesus macaque
intergenic/11:124831017-124831031-124829881-124829895-+/. intergenic Na +/. intergenic 11:124831017-124829881 1136.0 Rhesus macaque
intergenic/11:124830783-124830788-124829875-124829880-+/. intergenic Na +/. intergenic 11:124830783-124829875 908.0 Rhesus macaque