circRNA ID | Gene | Gene Type | Strand (circRNA/Gene) |
circRNA Type
The back-fusion junctions (BFJs) of circRNAs from genic regions may have three possible positions relative to the nearest exon-intron boundaries of their cognate linear transcripts, giving rise to three circRNA subtypes: (1) canonical (or completely boundary) circRNAs with both BFJs aligning to exon-intron boundaries; (2) half interior (or half boundary) circRNAs with one, but not both, of the BFJs aligning to exon-intron boundaries; (3) complete interior (or non-boundary) circRNAs with both junctions appearing inside of exons or introns. Lariats are byproducts of splicing and can be regarded as variants of canonical circRNAs; for clarity, we list lariats separately here. Intergenic circRNAs, derived from intergenic regions that often encode poorly annotated noncoding transcripts, can be considered a new distinct subtype of their own. We collectively refer to complete interior, half interior, and intergenic circRNAs as noncanonical circRNAs (nc-circRNAs) to distinguish them from canonical circRNAs (c-circRNAs). ![]() |
Position | Length | Species |
---|---|---|---|---|---|---|---|
intergenic/11:124831254-124831259-124831482-124831487--/. | intergenic | Na | -/. | intergenic | 11:124831259-124831487 | 228.0 | Rhesus macaque |
intergenic/11:124829797-124829799-124831389-124831391--/. | intergenic | Na | -/. | intergenic | 11:124829797-124831389 | 1592.0 | Rhesus macaque |
intergenic/11:124830405-124830413-124830861-124830869--/. | intergenic | Na | -/. | intergenic | 11:124830411-124830867 | 456.0 | Rhesus macaque |
intergenic/11:124829953-124829955-124830180-124830182--/. | intergenic | Na | -/. | intergenic | 11:124829955-124830182 | 227.0 | Rhesus macaque |
intergenic/11:124829872-124829880-124831008-124831016--/. | intergenic | Na | -/. | intergenic | 11:124829880-124831016 | 1136.0 | Rhesus macaque |
intergenic/11:124831008-124831016-124829872-124829880-+/. | intergenic | Na | +/. | intergenic | 11:124831016-124829880 | 1136.0 | Rhesus macaque |
intergenic/11:124831374-124831388-124831146-124831160-+/. | intergenic | Na | +/. | intergenic | 11:124831374-124831146 | 228.0 | Rhesus macaque |
intergenic/11:124830690-124830704-124829782-124829796-+/. | intergenic | Na | +/. | intergenic | 11:124830704-124829796 | 908.0 | Rhesus macaque |
intergenic/11:124831395-124831405-124830711-124830721-+/. | intergenic | Na | +/. | intergenic | 11:124831403-124830719 | 684.0 | Rhesus macaque |
intergenic/11:124830333-124830347-124829881-124829895-+/. | intergenic | Na | +/. | intergenic | 11:124830333-124829881 | 452.0 | Rhesus macaque |