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Species: Rhesus macaque
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circRNA ID Gene Gene Type Strand (circRNA/Gene)
circRNA Type i

The back-fusion junctions (BFJs) of circRNAs from genic regions may have three possible positions relative to the nearest exon-intron boundaries of their cognate linear transcripts, giving rise to three circRNA subtypes:

(1) canonical (or completely boundary) circRNAs with both BFJs aligning to exon-intron boundaries;

(2) half interior (or half boundary) circRNAs with one, but not both, of the BFJs aligning to exon-intron boundaries;

(3) complete interior (or non-boundary) circRNAs with both junctions appearing inside of exons or introns.

Lariats are byproducts of splicing and can be regarded as variants of canonical circRNAs; for clarity, we list lariats separately here.

Intergenic circRNAs, derived from intergenic regions that often encode poorly annotated noncoding transcripts, can be considered a new distinct subtype of their own.

We collectively refer to complete interior, half interior, and intergenic circRNAs as noncanonical circRNAs (nc-circRNAs) to distinguish them from canonical circRNAs (c-circRNAs).

CircRNA Types Diagram
Position Length Species
intergenic/11:124831254-124831259-124831482-124831487--/. intergenic Na -/. intergenic 11:124831259-124831487 228.0 Rhesus macaque
intergenic/11:124829797-124829799-124831389-124831391--/. intergenic Na -/. intergenic 11:124829797-124831389 1592.0 Rhesus macaque
intergenic/11:124830405-124830413-124830861-124830869--/. intergenic Na -/. intergenic 11:124830411-124830867 456.0 Rhesus macaque
intergenic/11:124829953-124829955-124830180-124830182--/. intergenic Na -/. intergenic 11:124829955-124830182 227.0 Rhesus macaque
intergenic/11:124829872-124829880-124831008-124831016--/. intergenic Na -/. intergenic 11:124829880-124831016 1136.0 Rhesus macaque
intergenic/11:124831008-124831016-124829872-124829880-+/. intergenic Na +/. intergenic 11:124831016-124829880 1136.0 Rhesus macaque
intergenic/11:124831374-124831388-124831146-124831160-+/. intergenic Na +/. intergenic 11:124831374-124831146 228.0 Rhesus macaque
intergenic/11:124830690-124830704-124829782-124829796-+/. intergenic Na +/. intergenic 11:124830704-124829796 908.0 Rhesus macaque
intergenic/11:124831395-124831405-124830711-124830721-+/. intergenic Na +/. intergenic 11:124831403-124830719 684.0 Rhesus macaque
intergenic/11:124830333-124830347-124829881-124829895-+/. intergenic Na +/. intergenic 11:124830333-124829881 452.0 Rhesus macaque