circRNA ID | Gene | Gene Type | Strand (circRNA/Gene) |
circRNA Type
The back-fusion junctions (BFJs) of circRNAs from genic regions may have three possible positions relative to the nearest exon-intron boundaries of their cognate linear transcripts, giving rise to three circRNA subtypes: (1) canonical (or completely boundary) circRNAs with both BFJs aligning to exon-intron boundaries; (2) half interior (or half boundary) circRNAs with one, but not both, of the BFJs aligning to exon-intron boundaries; (3) complete interior (or non-boundary) circRNAs with both junctions appearing inside of exons or introns. Lariats are byproducts of splicing and can be regarded as variants of canonical circRNAs; for clarity, we list lariats separately here. Intergenic circRNAs, derived from intergenic regions that often encode poorly annotated noncoding transcripts, can be considered a new distinct subtype of their own. We collectively refer to complete interior, half interior, and intergenic circRNAs as noncanonical circRNAs (nc-circRNAs) to distinguish them from canonical circRNAs (c-circRNAs). ![]() |
Position | Length | Species |
---|---|---|---|---|---|---|---|
ACTB/7:5528500-5528503-5529630-5529633--/- | ACTB | protein_coding | -/- | interior | 7:5528503-5529633 | 1130.0 | Human |
ACTB/7:5528509-5528518-5529334-5529343--/- | ACTB | protein_coding | -/- | interior | 7:5528509-5529334 | 825.0 | Human |
ACTB/7:5528555-5528557-5529599-5529601--/- | ACTB | protein_coding | -/- | interior | 7:5528555-5529599 | 1044.0 | Human |
ACTB/7:5528563-5528564-5528708-5528709--/- | ACTB | protein_coding | -/- | partial | 7:5528563-5528708 | 145.0 | Human |
ACTB/7:5528570-5528570-5528840-5528840--/- | ACTB | protein_coding | -/- | interior | 7:5528570-5528840 | 270.0 | Human |
ACTB/7:5528775-5528779-5529102-5529106--/- | ACTB | protein_coding | -/- | interior | 7:5528779-5529106 | 327.0 | Human |
ACTB/7:5529165-5529168-5529565-5529568--/- | ACTB | protein_coding | -/- | interior | 7:5529165-5529565 | 400.0 | Human |
ACTG1/17:81509985-81509987-81510510-81510512--/- | ACTG1 | protein_coding | -/- | interior | 17:81509985-81510510 | 525.0 | Human |
ACTG1/17:81510042-81510043-81510295-81510296--/- | ACTG1 | protein_coding | -/- | interior | 17:81510042-81510295 | 253.0 | Human |
ACTG1/17:81510268-81510269-81510650-81510651--/- | ACTG1 | protein_coding | -/- | interior | 17:81510269-81510651 | 382.0 | Human |