circRNA ID | Gene | Gene Type | Strand (circRNA/Gene) |
circRNA Type
The back-fusion junctions (BFJs) of circRNAs from genic regions may have three possible positions relative to the nearest exon-intron boundaries of their cognate linear transcripts, giving rise to three circRNA subtypes: (1) canonical (or completely boundary) circRNAs with both BFJs aligning to exon-intron boundaries; (2) half interior (or half boundary) circRNAs with one, but not both, of the BFJs aligning to exon-intron boundaries; (3) complete interior (or non-boundary) circRNAs with both junctions appearing inside of exons or introns. Lariats are byproducts of splicing and can be regarded as variants of canonical circRNAs; for clarity, we list lariats separately here. Intergenic circRNAs, derived from intergenic regions that often encode poorly annotated noncoding transcripts, can be considered a new distinct subtype of their own. We collectively refer to complete interior, half interior, and intergenic circRNAs as noncanonical circRNAs (nc-circRNAs) to distinguish them from canonical circRNAs (c-circRNAs). ![]() |
Position | Length | Species |
---|---|---|---|---|---|---|---|
5_8S_rRNA::intergenic/KI270733.1:174038-174039-130402-130403-+/+ | 5_8S_rRNA::intergenic | rRNA | +/+ | intergenic | KI270733.1:174039-130403 | 43636.0 | Human |
5_8S_rRNA::intergenic/KI270733.1:174038-174039-171147-171148-+/+ | 5_8S_rRNA::intergenic | rRNA | +/+ | intergenic | KI270733.1:174039-171148 | 2891.0 | Human |
5_8S_rRNA::intergenic/KI270733.1:174043-174044-126263-126264-+/+ | 5_8S_rRNA::intergenic | rRNA | +/+ | intergenic | KI270733.1:174044-126264 | 47780.0 | Human |
5_8S_rRNA::intergenic/KI270733.1:174045-174045-171265-171265-+/+ | 5_8S_rRNA::intergenic | rRNA | +/+ | intergenic | KI270733.1:174045-171265 | 2780.0 | Human |
5_8S_rRNA::intergenic/KI270733.1:174050-174051-129036-129037-+/+ | 5_8S_rRNA::intergenic | rRNA | +/+ | intergenic | KI270733.1:174051-129037 | 45014.0 | Human |
5_8S_rRNA::intergenic/KI270733.1:174052-174053-125941-125942-+/+ | 5_8S_rRNA::intergenic | rRNA | +/+ | intergenic | KI270733.1:174053-125942 | 48111.0 | Human |
5_8S_rRNA::intergenic/KI270733.1:174060-174061-127134-127135-+/+ | 5_8S_rRNA::intergenic | rRNA | +/+ | intergenic | KI270733.1:174061-127135 | 46926.0 | Human |
5_8S_rRNA::intergenic/KI270733.1:174078-174078-176499-176499--/+ | 5_8S_rRNA::intergenic | rRNA | -/+ | intergenic | KI270733.1:174078-176499 | 2421.0 | Human |
5_8S_rRNA::intergenic/KI270733.1:174106-174109-129271-129274-+/+ | 5_8S_rRNA::intergenic | rRNA | +/+ | intergenic | KI270733.1:174109-129274 | 44835.0 | Human |
7SK/6:52995745-52995751-52995637-52995643-+/+ | 7SK | misc_RNA | +/+ | interior | 6:52995751-52995643 | 108.0 | Human |