circRNA ID | Gene | Gene Type | Strand (circRNA/Gene) |
circRNA Type
The back-fusion junctions (BFJs) of circRNAs from genic regions may have three possible positions relative to the nearest exon-intron boundaries of their cognate linear transcripts, giving rise to three circRNA subtypes: (1) canonical (or completely boundary) circRNAs with both BFJs aligning to exon-intron boundaries; (2) half interior (or half boundary) circRNAs with one, but not both, of the BFJs aligning to exon-intron boundaries; (3) complete interior (or non-boundary) circRNAs with both junctions appearing inside of exons or introns. Lariats are byproducts of splicing and can be regarded as variants of canonical circRNAs; for clarity, we list lariats separately here. Intergenic circRNAs, derived from intergenic regions that often encode poorly annotated noncoding transcripts, can be considered a new distinct subtype of their own. We collectively refer to complete interior, half interior, and intergenic circRNAs as noncanonical circRNAs (nc-circRNAs) to distinguish them from canonical circRNAs (c-circRNAs). ![]() |
Position | Length | Species |
---|---|---|---|---|---|---|---|
GSTM5/1:113918959-113918960-113902534-113902535-+/- | GSTM5 | protein_coding | +/- | antisense | 1:113918960-113902535 | 16425.0 | Crab-eating macaque |
DDX19B/20:59916999-59916999-59954159-59954159--/- | DDX19B | protein_coding | -/- | interior | 20:59916999-59954159 | 37160.0 | Crab-eating macaque |
CCDC127::intergenic/6:305206-305208-348287-348289--/- | CCDC127::intergenic | protein_coding | -/- | intergenic | 6:305208-348289 | 43081.0 | Crab-eating macaque |
GSTM5/1:113949061-113949064-113902731-113902734-+/- | GSTM5 | protein_coding | +/- | intergenic | 1:113949064-113902734 | 46330.0 | Crab-eating macaque |
UBB/16:16159977-16159982-16159521-16159526-+/- | UBB | protein_coding | +/- | antisense | 16:16159977-16159521 | 456.0 | Crab-eating macaque |
intergenic/8:142786293-142786313-142788270-142788290--/. | intergenic | Na | -/. | intergenic | 8:142786313-142788290 | 1977.0 | Crab-eating macaque |
intergenic/8:142788270-142788290-142786293-142786313-+/. | intergenic | Na | +/. | intergenic | 8:142788290-142786313 | 1977.0 | Crab-eating macaque |
intergenic/11:124263820-124263840-124264734-124264754--/. | intergenic | Na | -/. | intergenic | 11:124263833-124264747 | 914.0 | Crab-eating macaque |
FAHD2A/13:469166-469168-446980-446982-+/+ | FAHD2A | protein_coding | +/+ | partial | 13:469166-446980 | 22186.0 | Crab-eating macaque |
intergenic/11:124264734-124264754-124264050-124264070-+/. | intergenic | Na | +/. | intergenic | 11:124264740-124264056 | 684.0 | Crab-eating macaque |