circRNA ID | Gene | Gene Type | Strand (circRNA/Gene) |
circRNA Type
The back-fusion junctions (BFJs) of circRNAs from genic regions may have three possible positions relative to the nearest exon-intron boundaries of their cognate linear transcripts, giving rise to three circRNA subtypes: (1) canonical (or completely boundary) circRNAs with both BFJs aligning to exon-intron boundaries; (2) half interior (or half boundary) circRNAs with one, but not both, of the BFJs aligning to exon-intron boundaries; (3) complete interior (or non-boundary) circRNAs with both junctions appearing inside of exons or introns. Lariats are byproducts of splicing and can be regarded as variants of canonical circRNAs; for clarity, we list lariats separately here. Intergenic circRNAs, derived from intergenic regions that often encode poorly annotated noncoding transcripts, can be considered a new distinct subtype of their own. We collectively refer to complete interior, half interior, and intergenic circRNAs as noncanonical circRNAs (nc-circRNAs) to distinguish them from canonical circRNAs (c-circRNAs). ![]() |
Position | Length | Species |
---|---|---|---|---|---|---|---|
1600010M07Rik/7:109626280-109626281-109630976-109630977--/- | 1600010M07Rik | lncRNA | -/- | interior | 7:109626280-109630976 | 4696.0 | Mouse |
1600010M07Rik/7:109627419-109627420-109627671-109627672--/- | 1600010M07Rik | lncRNA | -/- | interior | 7:109627419-109627671 | 252.0 | Mouse |
1600010M07Rik/7:109628896-109628897-109629026-109629027--/- | 1600010M07Rik | lncRNA | -/- | interior | 7:109628896-109629026 | 130.0 | Mouse |
1600010M07Rik/7:109648156-109648156-109648259-109648259--/- | 1600010M07Rik | lncRNA | -/- | interior | 7:109648156-109648259 | 103.0 | Mouse |
1600010M07Rik/7:109650324-109650325-109654472-109654473--/- | 1600010M07Rik | lncRNA | -/- | interior | 7:109650325-109654473 | 4148.0 | Mouse |
1600010M07Rik/7:109650617-109650618-109651981-109651982--/- | 1600010M07Rik | lncRNA | -/- | interior | 7:109650617-109651981 | 1364.0 | Mouse |
1600010M07Rik/7:109650658-109650660-109651964-109651966--/- | 1600010M07Rik | lncRNA | -/- | interior | 7:109650658-109651964 | 1306.0 | Mouse |
1600010M07Rik/7:109650661-109650662-109651960-109651961--/- | 1600010M07Rik | lncRNA | -/- | interior | 7:109650661-109651960 | 1299.0 | Mouse |
1600010M07Rik/7:109650663-109650664-109651976-109651977--/- | 1600010M07Rik | lncRNA | -/- | interior | 7:109650663-109651976 | 1313.0 | Mouse |
1600010M07Rik/7:109650684-109650685-109651983-109651984--/- | 1600010M07Rik | lncRNA | -/- | interior | 7:109650684-109651983 | 1299.0 | Mouse |