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| circRNA ID | Gene | Gene Type | Strand (circRNA/Gene) |
circRNA Type
The back-fusion junctions (BFJs) of circRNAs from genic regions may have three possible positions relative to the nearest exon-intron boundaries of their cognate linear transcripts, giving rise to three circRNA subtypes: (1) canonical (or completely boundary) circRNAs with both BFJs aligning to exon-intron boundaries; (2) half interior (or half boundary) circRNAs with one, but not both, of the BFJs aligning to exon-intron boundaries; (3) complete interior (or non-boundary) circRNAs with both junctions appearing inside of exons or introns. Lariats are byproducts of splicing and can be regarded as variants of canonical circRNAs; for clarity, we list lariats separately here. Intergenic circRNAs, derived from intergenic regions that often encode poorly annotated noncoding transcripts, can be considered a new distinct subtype of their own. We collectively refer to complete interior, half interior, and intergenic circRNAs as noncanonical circRNAs (nc-circRNAs) to distinguish them from canonical circRNAs (c-circRNAs). 
|
Position | Length | Species |
|---|---|---|---|---|---|---|---|
| 1500004A13Rik/3:88723975-88723981-88728013-88728019--/- | 1500004A13Rik | lncRNA | -/- | interior | 3:88723978-88728016 | 4038.0 | Mouse |
| 1500004A13Rik/3:88723981-88723987-88728019-88728025--/- | 1500004A13Rik | lncRNA | -/- | interior | 3:88723981-88728019 | 4038.0 | Mouse |
| 1500004A13Rik/3:88725470-88725474-88725745-88725749--/- | 1500004A13Rik | lncRNA | -/- | interior | 3:88725474-88725749 | 275.0 | Mouse |
| 1500004A13Rik/3:88731683-88731684-88731795-88731796--/- | 1500004A13Rik | lncRNA | -/- | interior | 3:88731684-88731796 | 112.0 | Mouse |
| 1500011B03Rik/5:114946330-114946336-114946663-114946669--/- | 1500011B03Rik | protein_coding | -/- | interior | 5:114946330-114946663 | 333.0 | Mouse |
| 1500011B03Rik/5:114946716-114946721-114947279-114947284--/- | 1500011B03Rik | protein_coding | -/- | interior | 5:114946721-114947284 | 563.0 | Mouse |
| 1500011B03Rik/5:114947300-114947301-114951898-114951899--/- | 1500011B03Rik | protein_coding | -/- | interior | 5:114947300-114951898 | 4598.0 | Mouse |
| 1500011B03Rik/5:114950958-114950968-114961094-114961104--/- | 1500011B03Rik | protein_coding | -/- | interior | 5:114950958-114961094 | 10136.0 | Mouse |
| 1500011B03Rik/5:114951839-114951840-114960785-114960786--/- | 1500011B03Rik | protein_coding | -/- | interior | 5:114951840-114960786 | 8946.0 | Mouse |
| 1500011B03Rik/5:114960711-114960721-114951191-114951201-+/- | 1500011B03Rik | protein_coding | +/- | antisense | 5:114960711-114951191 | 9520.0 | Mouse |