circRNA ID | Gene | Gene Type | Strand (circRNA/Gene) |
circRNA Type
The back-fusion junctions (BFJs) of circRNAs from genic regions may have three possible positions relative to the nearest exon-intron boundaries of their cognate linear transcripts, giving rise to three circRNA subtypes: (1) canonical (or completely boundary) circRNAs with both BFJs aligning to exon-intron boundaries; (2) half interior (or half boundary) circRNAs with one, but not both, of the BFJs aligning to exon-intron boundaries; (3) complete interior (or non-boundary) circRNAs with both junctions appearing inside of exons or introns. Lariats are byproducts of splicing and can be regarded as variants of canonical circRNAs; for clarity, we list lariats separately here. Intergenic circRNAs, derived from intergenic regions that often encode poorly annotated noncoding transcripts, can be considered a new distinct subtype of their own. We collectively refer to complete interior, half interior, and intergenic circRNAs as noncanonical circRNAs (nc-circRNAs) to distinguish them from canonical circRNAs (c-circRNAs). ![]() |
Position | Length | Species |
---|---|---|---|---|---|---|---|
ACP1/2:277532-277532-277336-277336-+/+ | ACP1 | protein_coding | +/+ | interior | 2:277532-277336 | 196.0 | Human |
ACP1/2:277533-277538-277337-277342-+/+ | ACP1 | protein_coding | +/+ | interior | 2:277533-277337 | 196.0 | Human |
ACP6/1:147648247-147648252-147659777-147659782--/- | ACP6 | protein_coding | -/- | partial | 1:147648247-147659777 | 11530.0 | Human |
ACP6/1:147670042-147670042-147670171-147670171--/- | ACP6 | protein_coding | -/- | interior | 1:147670042-147670171 | 129.0 | Human |
ACSF3/16:89114485-89114489-89112089-89112093-+/+ | ACSF3 | protein_coding | +/+ | canonical (exon-exon) | 16:89114485-89112089 | 2396.0 | Human |
ACSL1/4:184770511-184770511-184773080-184773080--/- | ACSL1 | protein_coding | -/- | lariat | 4:184770511-184773080 | 2569.0 | Human |
ACSL3/2:222934682-222934687-222900668-222900673-+/+ | ACSL3 | protein_coding | +/+ | canonical (exon-exon) | 2:222934682-222900668 | 34014.0 | Human |
ACSL3/2:222941974-222941976-222924503-222924505-+/+ | ACSL3 | protein_coding | +/+ | interior | 2:222941974-222924503 | 17471.0 | Human |
ACSL5/10:112427504-112427508-112427344-112427348-+/+ | ACSL5 | protein_coding | +/+ | interior | 10:112427504-112427344 | 160.0 | Human |
ACSS1/20:25020011-25020013-25023643-25023645--/- | ACSS1 | protein_coding | -/- | partial | 20:25020011-25023643 | 3632.0 | Human |