circRNA ID | Gene | Gene Type | Strand (circRNA/Gene) |
circRNA Type
The back-fusion junctions (BFJs) of circRNAs from genic regions may have three possible positions relative to the nearest exon-intron boundaries of their cognate linear transcripts, giving rise to three circRNA subtypes: (1) canonical (or completely boundary) circRNAs with both BFJs aligning to exon-intron boundaries; (2) half interior (or half boundary) circRNAs with one, but not both, of the BFJs aligning to exon-intron boundaries; (3) complete interior (or non-boundary) circRNAs with both junctions appearing inside of exons or introns. Lariats are byproducts of splicing and can be regarded as variants of canonical circRNAs; for clarity, we list lariats separately here. Intergenic circRNAs, derived from intergenic regions that often encode poorly annotated noncoding transcripts, can be considered a new distinct subtype of their own. We collectively refer to complete interior, half interior, and intergenic circRNAs as noncanonical circRNAs (nc-circRNAs) to distinguish them from canonical circRNAs (c-circRNAs). ![]() |
Position | Length | Species |
---|---|---|---|---|---|---|---|
ACTG1/17:81510485-81510490-81510720-81510725--/- | ACTG1 | protein_coding | -/- | interior | 17:81510485-81510720 | 235.0 | Human |
ACTG1/17:81510591-81510595-81510752-81510756--/- | ACTG1 | protein_coding | -/- | interior | 17:81510591-81510752 | 161.0 | Human |
ACTG1/17:81511271-81511271-81511577-81511577--/- | ACTG1 | protein_coding | -/- | partial | 17:81511271-81511577 | 306.0 | Human |
ACTG1/17:81511917-81511925-81512019-81512027--/- | ACTG1 | protein_coding | -/- | interior | 17:81511917-81512019 | 102.0 | Human |
ACTL6A/3:179570202-179570205-179569821-179569824-+/+ | ACTL6A | protein_coding | +/+ | partial | 3:179570205-179569824 | 381.0 | Human |
ACTN1/14:68877085-68877086-68885579-68885580--/- | ACTN1 | protein_coding | -/- | interior | 14:68877085-68885579 | 8494.0 | Human |
ACTN1/14:68979007-68979012-68979236-68979241--/- | ACTN1 | protein_coding | -/- | interior | 14:68979012-68979241 | 229.0 | Human |
ACTN4/19:38702751-38702761-38702489-38702499-+/+ | ACTN4 | protein_coding | +/+ | interior | 19:38702751-38702489 | 262.0 | Human |
ACTN4/19:38703204-38703205-38702964-38702965-+/+ | ACTN4 | protein_coding | +/+ | interior | 19:38703204-38702964 | 240.0 | Human |
ACTN4/19:38704430-38704437-38704304-38704311-+/+ | ACTN4 | protein_coding | +/+ | interior | 19:38704430-38704304 | 126.0 | Human |