circRNA ID | Gene | Gene Type | Strand (circRNA/Gene) |
circRNA Type
The back-fusion junctions (BFJs) of circRNAs from genic regions may have three possible positions relative to the nearest exon-intron boundaries of their cognate linear transcripts, giving rise to three circRNA subtypes: (1) canonical (or completely boundary) circRNAs with both BFJs aligning to exon-intron boundaries; (2) half interior (or half boundary) circRNAs with one, but not both, of the BFJs aligning to exon-intron boundaries; (3) complete interior (or non-boundary) circRNAs with both junctions appearing inside of exons or introns. Lariats are byproducts of splicing and can be regarded as variants of canonical circRNAs; for clarity, we list lariats separately here. Intergenic circRNAs, derived from intergenic regions that often encode poorly annotated noncoding transcripts, can be considered a new distinct subtype of their own. We collectively refer to complete interior, half interior, and intergenic circRNAs as noncanonical circRNAs (nc-circRNAs) to distinguish them from canonical circRNAs (c-circRNAs). ![]() |
Position | Length | Species |
---|---|---|---|---|---|---|---|
ACSS1/20:25020014-25020016-25023646-25023648--/- | ACSS1 | protein_coding | -/- | interior | 20:25020014-25023646 | 3632.0 | Human |
ACTB/7:5527480-5527482-5527753-5527755--/- | ACTB | protein_coding | -/- | interior | 7:5527480-5527753 | 273.0 | Human |
ACTB/7:5527488-5527490-5528179-5528181--/- | ACTB | protein_coding | -/- | interior | 7:5527490-5528181 | 691.0 | Human |
ACTB/7:5528414-5528419-5529188-5529193--/- | ACTB | protein_coding | -/- | interior | 7:5528419-5529193 | 774.0 | Human |
ACTB/7:5528744-5528745-5529161-5529162--/- | ACTB | protein_coding | -/- | lariat | 7:5528744-5529161 | 417.0 | Human |
ACTB/7:5528975-5528976-5529130-5529131--/- | ACTB | protein_coding | -/- | interior | 7:5528975-5529130 | 155.0 | Human |
ACTB/7:5529207-5529207-5529357-5529357--/- | ACTB | protein_coding | -/- | interior | 7:5529207-5529357 | 150.0 | Human |
ACTB/7:5529540-5529545-5529661-5529666--/- | ACTB | protein_coding | -/- | partial | 7:5529540-5529661 | 121.0 | Human |
ACTG1/17:81510181-81510181-81510543-81510543--/- | ACTG1 | protein_coding | -/- | interior | 17:81510181-81510543 | 362.0 | Human |
ACTG1/17:81510191-81510192-81510356-81510357--/- | ACTG1 | protein_coding | -/- | interior | 17:81510191-81510356 | 165.0 | Human |