circRNA ID | Gene | Gene Type | Strand (circRNA/Gene) |
circRNA Type
The back-fusion junctions (BFJs) of circRNAs from genic regions may have three possible positions relative to the nearest exon-intron boundaries of their cognate linear transcripts, giving rise to three circRNA subtypes: (1) canonical (or completely boundary) circRNAs with both BFJs aligning to exon-intron boundaries; (2) half interior (or half boundary) circRNAs with one, but not both, of the BFJs aligning to exon-intron boundaries; (3) complete interior (or non-boundary) circRNAs with both junctions appearing inside of exons or introns. Lariats are byproducts of splicing and can be regarded as variants of canonical circRNAs; for clarity, we list lariats separately here. Intergenic circRNAs, derived from intergenic regions that often encode poorly annotated noncoding transcripts, can be considered a new distinct subtype of their own. We collectively refer to complete interior, half interior, and intergenic circRNAs as noncanonical circRNAs (nc-circRNAs) to distinguish them from canonical circRNAs (c-circRNAs). ![]() |
Position | Length | Species |
---|---|---|---|---|---|---|---|
ACTN4/19:38706021-38706021-38705019-38705019-+/+ | ACTN4 | protein_coding | +/+ | lariat | 19:38706021-38705019 | 1002.0 | Human |
ACTN4/19:38706022-38706022-38705020-38705020-+/+ | ACTN4 | protein_coding | +/+ | lariat | 19:38706022-38705020 | 1002.0 | Human |
ACTN4/19:38719581-38719582-38719252-38719253-+/+ | ACTN4 | protein_coding | +/+ | interior | 19:38719581-38719252 | 329.0 | Human |
ACTN4/19:38724332-38724337-38724016-38724021-+/+ | ACTN4 | protein_coding | +/+ | interior | 19:38724332-38724016 | 316.0 | Human |
ACTN4/19:38725796-38725802-38724283-38724289-+/+ | ACTN4 | protein_coding | +/+ | interior | 19:38725796-38724283 | 1513.0 | Human |
ACTN4/19:38725880-38725884-38724285-38724289-+/+ | ACTN4 | protein_coding | +/+ | interior | 19:38725880-38724285 | 1595.0 | Human |
ACTN4/19:38727825-38727826-38727101-38727102-+/+ | ACTN4 | protein_coding | +/+ | lariat | 19:38727826-38727102 | 724.0 | Human |
ACTN4/19:38729475-38729480-38729356-38729361-+/+ | ACTN4 | protein_coding | +/+ | interior | 19:38729480-38729361 | 119.0 | Human |
ACTN4/19:38729716-38729723-38729488-38729495-+/+ | ACTN4 | protein_coding | +/+ | interior | 19:38729716-38729488 | 228.0 | Human |
ACTN4/19:38729742-38729743-38729476-38729477-+/+ | ACTN4 | protein_coding | +/+ | interior | 19:38729742-38729476 | 266.0 | Human |