circRNA ID | Gene | Gene Type | Strand (circRNA/Gene) |
circRNA Type
The back-fusion junctions (BFJs) of circRNAs from genic regions may have three possible positions relative to the nearest exon-intron boundaries of their cognate linear transcripts, giving rise to three circRNA subtypes: (1) canonical (or completely boundary) circRNAs with both BFJs aligning to exon-intron boundaries; (2) half interior (or half boundary) circRNAs with one, but not both, of the BFJs aligning to exon-intron boundaries; (3) complete interior (or non-boundary) circRNAs with both junctions appearing inside of exons or introns. Lariats are byproducts of splicing and can be regarded as variants of canonical circRNAs; for clarity, we list lariats separately here. Intergenic circRNAs, derived from intergenic regions that often encode poorly annotated noncoding transcripts, can be considered a new distinct subtype of their own. We collectively refer to complete interior, half interior, and intergenic circRNAs as noncanonical circRNAs (nc-circRNAs) to distinguish them from canonical circRNAs (c-circRNAs). ![]() |
Position | Length | Species |
---|---|---|---|---|---|---|---|
ABCC3/17:50678024-50678025-50677920-50677921-+/+ | ABCC3 | protein_coding | +/+ | interior | 17:50678024-50677920 | 104.0 | Human |
ABCC3/17:50678048-50678052-50677901-50677905-+/+ | ABCC3 | protein_coding | +/+ | interior | 17:50678052-50677905 | 147.0 | Human |
ABCC3/17:50691363-50691363-50691247-50691247-+/+ | ABCC3 | protein_coding | +/+ | interior | 17:50691363-50691247 | 116.0 | Human |
ABCC3/17:50691364-50691373-50691248-50691257-+/+ | ABCC3 | protein_coding | +/+ | interior | 17:50691364-50691248 | 116.0 | Human |
ABCC3/17:50691373-50691376-50691268-50691271-+/+ | ABCC3 | protein_coding | +/+ | interior | 17:50691373-50691268 | 105.0 | Human |
ABCC3/17:50691497-50691498-50691248-50691249-+/+ | ABCC3 | protein_coding | +/+ | interior | 17:50691497-50691248 | 249.0 | Human |
ABCC3/17:50691497-50691498-50691364-50691365-+/+ | ABCC3 | protein_coding | +/+ | interior | 17:50691497-50691364 | 133.0 | Human |
ABCC3/17:50691499-50691507-50691250-50691258-+/+ | ABCC3 | protein_coding | +/+ | interior | 17:50691499-50691250 | 249.0 | Human |
ABCC4/13:95021513-95021520-95021642-95021649--/- | ABCC4 | protein_coding | -/- | interior | 13:95021513-95021642 | 129.0 | Human |
ABCD4/14:74286384-74286386-74286493-74286495--/- | ABCD4 | protein_coding | -/- | interior | 14:74286386-74286495 | 109.0 | Human |