circRNA ID | Gene | Gene Type | Strand (circRNA/Gene) |
circRNA Type
The back-fusion junctions (BFJs) of circRNAs from genic regions may have three possible positions relative to the nearest exon-intron boundaries of their cognate linear transcripts, giving rise to three circRNA subtypes: (1) canonical (or completely boundary) circRNAs with both BFJs aligning to exon-intron boundaries; (2) half interior (or half boundary) circRNAs with one, but not both, of the BFJs aligning to exon-intron boundaries; (3) complete interior (or non-boundary) circRNAs with both junctions appearing inside of exons or introns. Lariats are byproducts of splicing and can be regarded as variants of canonical circRNAs; for clarity, we list lariats separately here. Intergenic circRNAs, derived from intergenic regions that often encode poorly annotated noncoding transcripts, can be considered a new distinct subtype of their own. We collectively refer to complete interior, half interior, and intergenic circRNAs as noncanonical circRNAs (nc-circRNAs) to distinguish them from canonical circRNAs (c-circRNAs). ![]() |
Position | Length | Species |
---|---|---|---|---|---|---|---|
ABCC1/16:16141934-16141939-16141798-16141803-+/+ | ABCC1 | protein_coding | +/+ | interior | 16:16141934-16141798 | 136.0 | Human |
ABCC1/16:16142732-16142738-16142314-16142320-+/+ | ABCC1 | protein_coding | +/+ | interior | 16:16142738-16142320 | 418.0 | Human |
ABCC1/16:16142768-16142522-+/+ | ABCC1 | protein_coding | +/+ | interior | 16:16142768-16142522 | 246.0 | Human |
ABCC1/16:16142768-16142775-16142522-16142529-+/+ | ABCC1 | protein_coding | +/+ | interior | 16:16142768-16142522 | 246.0 | Human |
ABCC2/10:99796674-99796678-99796493-99796497-+/+ | ABCC2 | protein_coding | +/+ | interior | 10:99796674-99796493 | 181.0 | Human |
ABCC2/10:99797324-99797329-99793611-99793616-+/+ | ABCC2 | protein_coding | +/+ | interior | 10:99797324-99793611 | 3713.0 | Human |
ABCC2/10:99804171-99804172-99804040-99804041-+/+ | ABCC2 | protein_coding | +/+ | interior | 10:99804171-99804040 | 131.0 | Human |
ABCC2/10:99805429-99805430-99804194-99804195-+/+ | ABCC2 | protein_coding | +/+ | interior | 10:99805429-99804194 | 1235.0 | Human |
ABCC2/10:99813142-99813146-99792231-99792235-+/+ | ABCC2 | protein_coding | +/+ | canonical (exon-exon) | 10:99813146-99792235 | 20911.0 | Human |
ABCC2/10:99818931-99818932-99818830-99818831-+/+ | ABCC2 | protein_coding | +/+ | interior | 10:99818931-99818830 | 101.0 | Human |