circRNA ID | Gene | Gene Type | Strand (circRNA/Gene) |
circRNA Type
The back-fusion junctions (BFJs) of circRNAs from genic regions may have three possible positions relative to the nearest exon-intron boundaries of their cognate linear transcripts, giving rise to three circRNA subtypes: (1) canonical (or completely boundary) circRNAs with both BFJs aligning to exon-intron boundaries; (2) half interior (or half boundary) circRNAs with one, but not both, of the BFJs aligning to exon-intron boundaries; (3) complete interior (or non-boundary) circRNAs with both junctions appearing inside of exons or introns. Lariats are byproducts of splicing and can be regarded as variants of canonical circRNAs; for clarity, we list lariats separately here. Intergenic circRNAs, derived from intergenic regions that often encode poorly annotated noncoding transcripts, can be considered a new distinct subtype of their own. We collectively refer to complete interior, half interior, and intergenic circRNAs as noncanonical circRNAs (nc-circRNAs) to distinguish them from canonical circRNAs (c-circRNAs). ![]() |
Position | Length | Species |
---|---|---|---|---|---|---|---|
ACSL3/2:222930790-222930791-222930619-222930620-+/+ | ACSL3 | protein_coding | +/+ | partial | 2:222930790-222930619 | 171.0 | Human |
ACSL3/2:222932345-222932350-222932020-222932025-+/+ | ACSL3 | protein_coding | +/+ | interior | 2:222932345-222932020 | 325.0 | Human |
ACTB/7:5527303-5527307-5527791-5527795--/- | ACTB | protein_coding | -/- | interior | 7:5527303-5527791 | 488.0 | Human |
ACTB/7:5528526-5528530-5529196-5529200--/- | ACTB | protein_coding | -/- | interior | 7:5528526-5529196 | 670.0 | Human |
ACTB/7:5528542-5528546-5529212-5529216--/- | ACTB | protein_coding | -/- | interior | 7:5528542-5529212 | 670.0 | Human |
ACTB/7:5528752-5528752-5529160-5529160--/- | ACTB | protein_coding | -/- | lariat | 7:5528752-5529160 | 408.0 | Human |
ACTG1/17:81510392-81510397-81510524-81510529--/- | ACTG1 | protein_coding | -/- | partial | 17:81510392-81510524 | 132.0 | Human |
ACTG1/17:81511249-81511254-81512038-81512043--/- | ACTG1 | protein_coding | -/- | interior | 17:81511254-81512043 | 789.0 | Human |
ACTG1/17:81511469-81511471-81511963-81511965--/- | ACTG1 | protein_coding | -/- | interior | 17:81511469-81511963 | 494.0 | Human |
ACTG1/17:81511917-81511925-81512019-81512027--/- | ACTG1 | protein_coding | -/- | interior | 17:81511917-81512019 | 102.0 | Human |