circRNA ID | Gene | Gene Type | Strand (circRNA/Gene) |
circRNA Type
The back-fusion junctions (BFJs) of circRNAs from genic regions may have three possible positions relative to the nearest exon-intron boundaries of their cognate linear transcripts, giving rise to three circRNA subtypes: (1) canonical (or completely boundary) circRNAs with both BFJs aligning to exon-intron boundaries; (2) half interior (or half boundary) circRNAs with one, but not both, of the BFJs aligning to exon-intron boundaries; (3) complete interior (or non-boundary) circRNAs with both junctions appearing inside of exons or introns. Lariats are byproducts of splicing and can be regarded as variants of canonical circRNAs; for clarity, we list lariats separately here. Intergenic circRNAs, derived from intergenic regions that often encode poorly annotated noncoding transcripts, can be considered a new distinct subtype of their own. We collectively refer to complete interior, half interior, and intergenic circRNAs as noncanonical circRNAs (nc-circRNAs) to distinguish them from canonical circRNAs (c-circRNAs). ![]() |
Position | Length | Species |
---|---|---|---|---|---|---|---|
ACTN4/19:38725796-38725802-38724283-38724289-+/+ | ACTN4 | protein_coding | +/+ | interior | 19:38725796-38724283 | 1513.0 | Human |
ACTN4/19:38729716-38729723-38729488-38729495-+/+ | ACTN4 | protein_coding | +/+ | interior | 19:38729716-38729488 | 228.0 | Human |
ACTN4/19:38729832-38729835-38729604-38729607-+/+ | ACTN4 | protein_coding | +/+ | interior | 19:38729832-38729604 | 228.0 | Human |
ACTN4/19:38729895-38729901-38729631-38729637-+/+ | ACTN4 | protein_coding | +/+ | interior | 19:38729901-38729637 | 264.0 | Human |
ACTN4/19:38730466-38730467-38730349-38730350-+/+ | ACTN4 | protein_coding | +/+ | interior | 19:38730466-38730349 | 117.0 | Human |
ACTR2/2:65265176-65265177-65239852-65239853-+/+ | ACTR2 | protein_coding | +/+ | canonical (exon-exon) | 2:65265177-65239853 | 25324.0 | Human |
ACTR8/3:53867608-53867610-53877340-53877342--/- | ACTR8 | protein_coding | -/- | interior | 3:53867608-53877340 | 9732.0 | Human |
ADAM10/15:58596869-58596870-58597034-58597035--/- | ADAM10 | protein_coding | -/- | interior | 15:58596869-58597034 | 165.0 | Human |
ADAM10/15:58749480-58749482-58749733-58749735--/- | ADAM10 | protein_coding | -/- | partial | 15:58749482-58749735 | 253.0 | Human |
ADAM17/2:9509982-9509983-9527958-9527959--/- | ADAM17 | protein_coding | -/- | interior | 2:9509982-9527958 | 17976.0 | Human |