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Tissue: A375
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circRNA ID Gene Gene Type Strand (circRNA/Gene)
circRNA Type i

The back-fusion junctions (BFJs) of circRNAs from genic regions may have three possible positions relative to the nearest exon-intron boundaries of their cognate linear transcripts, giving rise to three circRNA subtypes:

(1) canonical (or completely boundary) circRNAs with both BFJs aligning to exon-intron boundaries;

(2) half interior (or half boundary) circRNAs with one, but not both, of the BFJs aligning to exon-intron boundaries;

(3) complete interior (or non-boundary) circRNAs with both junctions appearing inside of exons or introns.

Lariats are byproducts of splicing and can be regarded as variants of canonical circRNAs; for clarity, we list lariats separately here.

Intergenic circRNAs, derived from intergenic regions that often encode poorly annotated noncoding transcripts, can be considered a new distinct subtype of their own.

We collectively refer to complete interior, half interior, and intergenic circRNAs as noncanonical circRNAs (nc-circRNAs) to distinguish them from canonical circRNAs (c-circRNAs).

CircRNA Types Diagram
Position Length Species
ADAMTS12/5:33799496-33799501-33799703-33799708--/- ADAMTS12 protein_coding -/- interior 5:33799497-33799704 207.0 Human
ADAR/1:154589792-154589794-154589928-154589930--/- ADAR protein_coding -/- partial 1:154589792-154589928 136.0 Human
ADCY3/2:24825184-24825186-24819918-24819920-+/- ADCY3 protein_coding +/- antisense 2:24825186-24819920 5266.0 Human
ADCY3/2:24828049-24828054-24827942-24827947-+/- ADCY3 protein_coding +/- antisense 2:24828049-24827942 107.0 Human
ADD1/4:2915038-2915041-2881895-2881898-+/+ ADD1 protein_coding +/+ canonical (exon-exon) 4:2915038-2881895 33143.0 Human
ADGRA3/4:22392549-22392555-22402804-22402810--/- ADGRA3 protein_coding -/- interior 4:22392549-22402804 10255.0 Human
ADGRA3/4:22504488-22504489-22504688-22504689--/- ADGRA3 protein_coding -/- interior 4:22504488-22504688 200.0 Human
ADIPOR1/1:202949090-202949092-202949336-202949338--/- ADIPOR1 protein_coding -/- interior 1:202949090-202949336 246.0 Human
ADNP/20:50889521-50889522-50891566-50891567--/- ADNP protein_coding -/- interior 20:50889521-50891566 2045.0 Human
ADO/10:62805269-62805276-62805002-62805009-+/+ ADO protein_coding +/+ interior 10:62805276-62805009 267.0 Human